Reduced mtDNA Copy Number Links to Vascular Calcification and Restores After Transplantation

https://www.mdpi.com/2073-4409/14/12/917

Abstract

Patients with chronic kidney disease (CKD) face an increased risk of early vascular aging, progressive vascular calcification, and premature death. With increasing age, mitochondrial function and mitochondrial DNA copy number (mtDNA-cn) decline. This has been identified as an independent predictor of frailty and mortality in cardiovascular diseases (CVDs) and cancer. However, the relationship between mtDNA-cn and vascular calcification in the context of a uremic milieu remains ambiguous. We hypothesize that a lower mtDNA-cn is associated with medial calcification, as both are linked to impaired vascular health and accelerated aging. mtDNA-cn was analyzed in 211 CKD5 patients undergoing renal transplantation (RTx) and 196 healthy controls using quantitative PCR (qPCR) for three mtDNA genes (mtND1, mtND4, and mtCOX1) and single-locus nuclear gene hemoglobin beta (HbB). In 32 patients, mtDNA-cn was also quantified one year after RTx. The association between mtDNA-cn and vascular calcification scores, circulatory cell-free (ccf) mtDNA in plasma, and the surrogate marker of biological aging (skin autofluorescence) and CVD risk was assessed. mtDNA-cn was significantly lower in CKD5 patients than in controls and correlated with biological age, vascular calcification, and CVD risk. One year after RTx there was a significant recovery of mtDNA-cn in male patients compared to baseline levels. mtDNA-cn and ccf-mtDNA were inversely correlated. This prospective study provides novel insights into the link between low mtDNA-cn and vascular aging. It demonstrates that RTx restores mtDNA levels and may improve oxidative phosphorylation capacity in CKD. Further investigation is warranted to evaluate mtDNA as a biologically relevant biomarker and a potential therapeutic target for early vascular aging in the uremic environment.

O3 summary and critique of whole paper:

Paper at-a-glance

Aspect Key Points
Objective Test whether a reduced mitochondrial-DNA copy number (mtDNA-cn) is linked to vascular calcification in chronic kidney disease stage 5 (CKD5) and whether renal transplantation (RTx) restores mtDNA-cn.
Design & cohorts Prospective, single-centre study.
• 211 CKD5 patients scheduled for living-donor RTx (baseline).
• 196 healthy kidney donors as controls.
• 32 recipients re-sampled 1 year post-RTx.
Measurements • qPCR of three mt genes (mtND1, mtND4, mtCOX1) normalised to HbB.
• Circulating cell-free mtDNA (ccf-mtDNA) in 41 patients.
• Vascular ageing endpoints: epigastric-artery medial calcification score, coronary artery calcium (CAC) score, aortic augmentation index, biological age by skin autofluorescence (SAF), Framingham risk score.
• Statistics: non-parametric tests; logistic regression for medial calcification.
Main findings • CKD5 patients showed ∼45 %–50 % lower mtDNA-cn than controls across all three genes (e.g., mtND4 median 81 vs 153).
• Lower mtDNA-cn correlated with higher medial calcification, higher CAC, older biological age and higher FRS; the gradient was clearest for mtND4 (Table 3).
• An inverse association between mtND4-cn and plasma ccf-mtDNA (ρ = –0.49, p = 0.001) suggests that depleted cellular mtDNA accompanies extracellular mtDNA release.
• One year after RTx, male recipients showed significant mtDNA-cn recovery (mtND4 ↑, p = 0.002; mtCOX1 ↑, p = 0.05); the small female subset showed no clear change.
• In a five-year follow-up, low baseline mtND4-cn flowed toward subsequent cardiovascular events in a Sankey analysis.
Authors’ conclusion Low mtDNA-cn is a hallmark of early vascular ageing in CKD. RTx partially restores mtDNA-cn, supporting its use—alone or with ccf-mtDNA—as a non-invasive biomarker and potential therapeutic target.

Critical appraisal

Strengths

  1. Well-characterised cohort – Detailed biochemical, imaging, histological and functional vascular measurements give a multidimensional view of “early vascular ageing”.
  2. Multiple mtDNA loci – Measuring three mitochondrial genes and confirming high inter-gene correlation strengthens the copy-number signal.
  3. Longitudinal component – Re-sampling after RTx provides a quasi-interventional look at mitochondrial recovery.
  4. Integration of ccf-mtDNA – Combining intracellular and extracellular mtDNA metrics offers mechanistic insight into mitochondrial stress and inflammation.

Limitations

Issue Impact on inference
Selection bias – Only RTx-eligible CKD5 patients (generally healthier, younger, fewer comorbidities) were included. Limits generalisability to the broader dialysis population. Authors acknowledge this.
Control mismatch – Donors were not age- or sex-matched (67 % male in patients vs 38 % male in controls). Sex and age confounding could inflate effect sizes despite stratified analyses.
Small follow-up sample, female under-representation – 32 follow-up samples, only 9 women. Reduces power to detect sex-specific recovery; the apparent male-only increase may be spurious.
Observational & unadjusted p-values – No correction for multiple testing; logistic regression showed age/sex—not mtDNA-cn—predicted medial calcification when modelled together. Weakens claims of independent causal links.
Possible donor DNA carry-over – Authors speculate that restored mtDNA-cn might partly reflect donor-derived mtDNA microchimerism. Blurs interpretation of post-RTx recovery as intrinsic mitochondrial rejuvenation.
Single time-point for vascular outcomes – Calcification progression was not tracked after transplantation. Unable to link mtDNA-cn recovery to hard vascular endpoints.

Opportunities for future work

  • Matched multi-centre cohorts – Broader demographic representation and matched controls would clarify the mtDNA-cn–vascular calcification relationship.
  • Mechanistic assays – Functional mitochondrial analyses (e.g., OXPHOS capacity, ROS production) in vascular tissue could determine whether low mtDNA-cn is a cause or consequence of calcification.
  • Longitudinal vascular imaging – Serial CAC scans post-RTx could test whether mtDNA-cn recovery translates into slowed calcification.
  • Interventional trials – Agents that boost mitochondrial biogenesis (e.g., exercise, PGC-1α activators) or reduce mitochondrial damage (antioxidants, mitophagy inducers) could be assessed for effects on mtDNA-cn and vascular health.

Take-home message

The study compellingly links mitochondrial genome depletion to the calcified, prematurely aged vasculature of advanced CKD and hints that successful kidney transplantation can revive mitochondrial quantity—at least in men. While methodological caveats temper causal claims, the work spotlights mtDNA-cn (with ccf-mtDNA) as a promising, easily accessible biomarker worth validating in larger, better-controlled cohorts and mechanistic studies.

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