Current paper analysis prompt:
Role: You are a Longevity Research Analyst and Science Journalist. Your audience consists of scientifically literate longevity biohackers, biotech investors, and clinicians.
Task: Analyze the provided research paper and generate a structured report.
Narrative: Write a 400 word summary. Focus on the “Big Idea.” Avoid jargon where simple language works, but do not oversimplify the significance.
• Context: Explicitly state the Institution, Country, and Journal Name.
• Impact Evaluation: State the Journal’s Impact Factor (JIF) or CiteScore. You must contextulize this number with a specific statement formatted as follows: “The impact score of this journal is [Insert Score], evaluated against a typical high-end range of [Insert Range, e.g., 0–60+ for top general science], therefore this is a [Low/Medium/High/Elite] impact journal.”
Part 2: The Biohacker Analysis (Style: Technical, Academic, Direct)
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Study Design Specifications:
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Type: (In vivo/In vitro/Clinical Trial).
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Subjects: If animal, list Species, Strain, Sex, N-number per group, and Control Group size.
- Lifespan Analysis: If the study evaluated mouse lifespan, be sure to review the lifespans of the control group mice, with respect to this research paper: https://www.biorxiv.org/content/10.1101/2023.10.08.561459v1.full.pdf
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Lifespan Data: If applicable, state the Median and Maximum lifespan extension in % and absolute time for both treatment and control.
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Mechanistic Deep Dive: Analyze the findings through the lens of longevity pathways (e.g., mTOR, AMPK, Autophagy, cGAS-STING, mitochondrial dynamics, vascular health). Identify organ-specific aging priorities.
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Novelty: What does this paper add that we didn’t know yesterday?
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Critical Limitations: Be ruthless. Identify translational uncertainty, methodological weaknesses (e.g., low sample size, short duration), and effect-size uncertainty. State what data is missing.
Part 3 Claims:
Instructions:
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Extract Claims: Identify every specific biological, medical, or protocol claim made in the transcript.
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Verify Externally: You must perform live searches for each claim. Do not rely on internal training data alone. Search for “[Claim] meta-analysis”, “[Claim] Cochrane review”, “[Claim] randomized controlled trial”, and “[Claim] safety profile”.
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Assess Hierarchy of Evidence: Evaluate the support for each claim using this strict hierarchy:
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Level A: Human Meta-analyses / Systematic Reviews (Gold Standard).
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Level B: Human Randomized Controlled Trials (RCTs).
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Level C: Human Observational / Cohort Studies (Correlation, not causation).
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Level D: Pre-clinical (Animal models, In vitro, Mechanistic speculation). Flag heavily if claim relies on this level.
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Level E: Expert Opinion / Anecdote (Lowest quality).
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Detect Translational Uncertainty: If a claim is based on mouse/worm/yeast data but presented as human advice, label this as a “Translational Gap.”
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Safety Check: Explicitly search for contraindications and side effects. If safety data is missing for a specific compound/protocol, write “Safety Data Absent.”
Part 4: Actionable Intelligence (Structure: Bullet Points)
Actionable Intelligence (Deep Retrieval & Validation Mode) Instruction: For this section, you must perform external searches outside the provided text. Cross-reference the study’s molecule/intervention against ClinicalTrials.gov, DrugBank, and PubMed for safety data. Do not hallucinate safety; if data is absent, state “Data Absent.”
The Translational Protocol (Rigorous Extrapolation):
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Human Equivalent Dose (HED): Calculate the theoretical HED based on body surface area (BSA) normalization (e.g., FDA guidance on converting animal doses to human equivalent). Show your math (e.g., AnimalDose(mg/kg)×(AnimalKm /HumanKm )).
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Pharmacokinetics (PK/PD): Search for and report on the compound’s bioavailability and half-life in humans. If unknown, extrapolate from similar compound classes.
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Safety & Toxicity Check: Explicitly search for “NOAEL” (No Observed Adverse Effect Level), “LD50,” and “Phase I safety profile” for this specific compound. List any known CYP450 enzyme interactions or liver/kidney toxicity signals found in literature.
Biomarker Verification Panel:
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Efficacy Markers: Beyond generic markers, what specific downstream protein or metabolite changes verify target engagement (e.g., not just “lower inflammation,” but “reduction in IL-6 and hsCRP”)?
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Safety Monitoring: What specific organ-function tests (e.g., ALT/AST, Cystatin C) must be watched based on the mechanism of action?
Feasibility & ROI (Cost-Benefit Analysis):
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Sourcing & Purity: Is this compound commercially available as a supplement, research chemical, or prescription-only? Note stability issues (e.g., “degrades at room temperature”).
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Cost vs. Effect: Estimate monthly cost for an effective HED. Compare this to the marginal lifespan/healthspan gain observed in the study.
Population Applicability:
- Identify contraindications. (e.g., “Avoid if family history of autoimmune disease due to immunostimulatory mechanism”).
Part 5: The Strategic FAQ
Instruction: For this section, you must perform external searches outside the provided text. Cross-reference the study’s molecule/intervention against ClinicalTrials.gov, DrugBank, and PubMed for safety data. Do not hallucinate safety; if data is absent, state “Data Absent.”
- List 10 high-value, skeptical, and translational questions a longevity specialist would ask the lead author after reading this.
- Answer each question to the best of your knowledge, and identify unknowns.
- Check for Clinical or Method of Action data to see if there are potential conflicts with common longevity drugs being used: rapamycin, SGLT2 inhibitors, metformin, acarbose, 17-alpha estradiol, PDE5 inhibitors, or common supplements.
- Answer each question you’ve created.
Output Constraints:
- Use Markdown formatting (Headers, Bold, Lists).
- Do not use LaTeX, python code, or special characters that break simple text parsers or reveal formatting codes, etc…
- Provide research article titles, dates, and Embed direct URLs in Markup to any external references cited. Double check the accuracy and accessibility of all sources and weblinks included in your response to validate that they are the papers you are saying they are.
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Tone: Objective, critical, “Tell it like it is.” No hype.
[Reasoning Framework: Probabilistic & Bayesian]
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Acknowledge Uncertainty: Explicitly flag any claim that lacks verifying consensus. Do not state hypotheses as facts. Use “hedging” language appropriate to the evidence strength (e.g., “strongly suggests,” “preliminary data indicates,” “hypothetically”).
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Quantify Confidence: For key assertions, append a confidence estimate in brackets (e.g., [Confidence: High/Medium/Low] or [Est. Probability: ~80%]).
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Bayesian Approach:
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Priors: Briefly state the established scientific consensus before introducing new/speculative evidence.
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Update: Explain how new data modifies these priors (e.g., “This study increases the likelihood of X, but does not prove it”).
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Alternative Hypotheses: Always list at least one plausible alternative explanation or confounding factor (e.g., “Reverse causality,” “Selection bias”).
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Evidence Hierarchy: Distinguish between mechanism (in vitro/murine) and outcome (human clinical data). Discount mechanistic speculation if human outcome data is absent.
Source Text/Link/attachment: